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Updated November 2019

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Nomenclature

Short Name:
PIM1
Full Name:
Proto-oncogene serine-threonine-protein kinase Pim-1
Alias:
  • EC 2.7.11.1

Classification

Type:
Protein-serine/threonine kinase
Group:
CAMK
Family:
PIM
SubFamily:
NA
 
 

Specific Links

Entrez-Gene Entry: 5292
Entrez-Protein Entry: NP_002639
GeneCards Entry: PIM1
KinBASE Entry: PIM1
OMIM Entry: 164960
Pfam Entry: P11309
PhosphoNET Entry: P11309
Phosphosite Plus Entry: 2119
Protein Data Bank Entry: 1XQZ
ScanSite Entry: P11309
Source Entry: PIM1
UCSD-Nature Entry: A001822
UniProt Entry: P11309
Kinexus Products: PIM1
Proto-oncogene serine/threonine-protein kinase Pim-1 pan-specific antibody AB-NK258-1
Proto-oncogene serine/threonine-protein kinase Pim-1 pan-specific antibody AB-NK258-2
RPS6 (230-238) KinSub - 40S ribosomal protein S6 (K230-R238, human) peptide; p70S6K protein kinase substrate peptide - Powder PE-01ADQ95
Proto-oncogene serine/threonine-protein kinase Pim-1 (V160-V181, human) peptide - Powder PE-01AQM80
Proto-oncogene serine/threonine-protein kinase Pim-1 (T114-G132, human) peptide - Powder PE-01BEQ99
PimSelectide - Pim1 protein kinase substrate peptide - Powder PE-01BIQ95

General Links

ClustalW2
GPS-Cuckoo
Human Protein Atlas
Kinase.com
Kinase Research
Kinasource
Kinomer
Netphorest
NetworKIN
Phosida
PhosphoElm
Protein Blast
ScanSite
String

Structure

Mol. Mass (Da):
45,412
# Amino Acids:
404
# mRNA Isoforms:
2
mRNA Isoforms:
45,412 Da (404 AA; P11309); 35,686 Da (313 AA; P11309-2)
4D Structure:
Binds to RP9. Isoform 2 is isolated as a monomer whereas isoform 1 complexes with other proteins. Isoform 1, but not isoform 2, binds BMX. Isoform 2 interacts with CDKN1B and FOXO3.
1D Structure:
Retrieve Gene Sequence
Retrieve Full Protein Sequence
Retrieve Catalytic Domain Sequence
 
3D Image (rendered using PV Viewer):

PDB ID
1XR1

Subfamily Alignment
subfamily domain
 
Domain Distribution:
Start End Domain
129 381 Pkinase
 

Kinexus Products

Click on entries below for direct links to relevant products from Kinexus for this protein kinase.
hiddentext
○ Proto-oncogene serine/threonine-protein kinase Pim-1 pan-specific antibody AB-NK258-1
○ Proto-oncogene serine/threonine-protein kinase Pim-1 pan-specific antibody AB-NK258-2
○ RPS6 (230-238) KinSub - 40S ribosomal protein S6 (K230-R238, human) peptide; p70S6K protein kinase substrate peptide - Powder PE-01ADQ95
○ Proto-oncogene serine/threonine-protein kinase Pim-1 (V160-V181, human) peptide - Powder PE-01AQM80
○ Proto-oncogene serine/threonine-protein kinase Pim-1 (T114-G132, human) peptide - Powder PE-01BEQ99
○ PimSelectide - Pim1 protein kinase substrate peptide - Powder PE-01BIQ95
 

Post-translation Modifications

For detailed information on phosphorylation of this kinase go to PhosphoNET
Serine phosphorylated:

S95, S99, S137, S189, S280+, S299-, S352.
Threonine phosphorylated:

T114+, T290+, T295-.
Tyrosine phosphorylated:

Y309+.
Ubiquitinated:
K96, K158, K260, K274, K285.
 

Distribution

Based on gene microarray analysis from the NCBI
Human Tissue Distribution
% Max Expression:

Mean Expression:

Number of Samples:

Standard Deviation:
% Max Expression:

Mean Expression:

Number of Samples:

Standard Deviation:
  • adipose
    13

    1268

    16

    1646

  • adrenal
    1.4

    135

    12

    159

  • bladder
    1.2

    113

    5

    112

  • brain
    14

    1292

    67

    2746

  • breast
    8

    746

    14

    683

  • cervix
    15

    1420

    51

    3068

  • colon
    7

    623

    23

    784

  • heart
    25

    2313

    38

    3519

  • intestine
    5

    442

    10

    350

  • kidney
    3

    283

    64

    256

  • liver
    2

    232

    21

    318

  • lung
    7

    655

    143

    546

  • lymphnode
    2

    147

    17

    76

  • ovary
    5

    478

    12

    368

  • pancreas
    2

    219

    15

    252

  • pituitary
    1.2

    113

    9

    88

  • prostate
    3

    294

    192

    153

  • salivarygland
    2

    151

    14

    263

  • skeletalmuscle"
    1.2

    116

    54

    73

  • skin
    8

    749

    56

    669

  • spinalcord
    2

    188

    19

    158

  • spleen
    3

    247

    21

    225

  • stomach
    3

    311

    23

    281

  • testis
    1.1

    103

    15

    84

  • thymus
    2

    194

    19

    179

  • thyroid
    39

    3655

    44

    5176

  • tonsil
    2

    167

    20

    95

  • trachea
    2

    161

    15

    140

  • uterus
    3

    239

    15

    229

  • reticulocytes"
    54

    5116

    14

    1507

  • t-lymphocytes
    18

    1690

    18

    876

  • b-lymphocytes
    100

    9422

    27

    14618

  • neutrophils
    1.5

    138

    53

    303

  • macrophages
    9

    872

    36

    745

  • sperm
    3

    265

    22

    475

 

Evolution

Species Conservation
PhosphoNET % Identity:
PhosphoNET % Similarity:
Homologene %
Identity:
PhosphoNET % Identity:
PhosphoNET % Similarity:
Homologene %
Identity:
  • tableheader
    100

    100

    100
  • tableheader
    46.1

    58

    99.5
  • tableheader
    58.7

    59.9

    98
  • tableheader
    -

    -

    99
  • tableheader
    -

    -

    -
  • tableheader
    46.2

    57.5

    99
  • tableheader
    -

    -

    -
  • tableheader
    85.9

    88.6

    94
  • tableheader
    75.3

    76.7

    97
  • tableheader
    -

    -

    -
  • tableheader
    48

    61.1

    -
  • tableheader
    -

    -

    83
  • tableheader
    51.5

    65.1

    74
  • tableheader
    37.4

    51.5

    73
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    46
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
For a wider analysis go to PhosphoNET Evolution in PhosphoNET
 

Binding Proteins

Examples of known interacting proteins
hiddentext
No. Name – UniProt ID
1 CDC25A - P30304
2 BAD - Q92934
3 CBX1 - P83916
4 PTPRO - Q16827
5 ABCG2 - Q9UNQ0
6 NFATC1 - O95644
7 STAT3 - P40763
 

Regulation

Activation:
Phosphorylation of Ser-280 and Tyr-309 increases phosphotransferase activity.
Inhibition:
NA
Synthesis:
NA
Degradation:
NA
 

Known Upstream Kinases

For further details on these substrates click on the Substrate Short Name or UniProt ID. Phosphosite Location is hyperlinked to PhosphoNET predictions.
Based on in vitro and/or in vivo phosphorylation data

Kinase Short Name UniProt ID (Human) Phosphosite Location Phosphosite Sequence Effect of Phosphorylation
PIM1 P11309 S95 LEVGMLLSKINSLAH
PIM1 P11309 S280 LKLIDFGSGALLKDT +
PIM1 P11309 T295 VYTDFDGTRVYSPPE -
BMX P51813 Y309 EWIRYHRYHGRSAAV +
 

Known Downstream Substrates

For further details on these substrates click on the Substrate Short Name or UniProt ID. Phosphosite Location is hyperlinked to PhosphoNET predictions.
Based on in vitro and/or in vivo phosphorylation data

Substrate Short Name UniProt ID (Human) Phosphosite Location Phosphosite Sequence Effect of Phosphorylation
ABCG2 Q9UNQ0 T362 GEKKKKITVFKEISY
AML2 Q13761 S149 GRSGRGKSFTLTITV
AML2 Q13761 T151 SGRGKSFTLTITVFT
AML2 Q13761 T153 RGKSFTLTITVFTNP
AML2 Q13761 T155 KSFTLTITVFTNPTQ
Bad Q92934 S118 GRELRRMSDEFVDSF -
Bad Q92934 S75 EIRSRHSSYPAGTED -
Bad Q92934 S99 PFRGRSRSAPPNLWA -
Cip1 (p21, CDKN1A) P38936 S145 GRKRRQTSMTDFYHS
Cip1 (p21, CDKN1A) P38936 T144 QGRKRRQTSMTDFYH -
FOXO3 (FKHRL1) O43524 S253 APRRRAVSMDNSNKY -
FOXO3 (FKHRL1) O43524 T32 QSRPRSCTWPLQRPE
H3.1 P68431 S11 TKQTARKSTGGKAPR +
MARK3 P27448 S96 KTQLNPTSLQKLFRE -
MARK3 P27448 T90 AIKIIDKTQLNPTSL -
MARK3 P27448 T95 DKTQLNPTSLQKLFR -
MDM2 Q00987 S166 SSRRRAISETEENSD
MDM2 Q00987 S186 RQRKRHKSDSISLSF
Myc P01106 S329 AKRVKLDSVRVLRQI
p27Kip1 P46527 T157 GIRKRPATDDSSTQN -
p27Kip1 P46527 T198 PGLRRRQT_______ -
Pim1 P11309 S280 LKLIDFGSGALLKDT +
Pim1 P11309 S95 LEVGMLLSKINSLAH
Pim1 P11309 T295 VYTDFDGTRVYSPPE -
 

Protein Kinase Specificity

Matrix of observed frequency (%) of amino acids in aligned protein substrate phosphosites

Kinections GIF
Matrix Type:
Experimentally derived from alignment of 33 known protein substrate phosphosites and 18 peptides phosphorylated by recombinant Pim1 in vitro tested in-house by Kinexus.
Domain #:
1
 

Inhibitors

For further details on these inhibitors click on the Compound Name and enter it into DrugKiNET or click on the ID's
Based on in vitro and/or in vivo phosphorylation data
Compound Name KD, Ki or IC50 (nM) PubChem ID ChEMBL ID PubMed ID
BI2536 Kd > 830 pM 11364421 513909 22037378
Staurosporine Kd = 1.4 nM 5279 16302800
CHEMBL494221 Ki > 5 nM 44219633 494221 19414255
SGI-1776 IC50 = 7 nM 19734450
Ro-31-8220 Kd = 8 nM 5083 6291 16302800
7-hydroxystaurosporine IC50 = 10 nM 72271 1236539
A 443654 IC50 = 10 nM 10172943 379300
AG-E-60384 IC50 < 25 nM 6419741 413188 22037377
Quercetin Kd = 25 nM 5280343 50 16302800
SB218078 IC50 < 25 nM 447446 289422 22037377
Bisindolylmaleimide IV Kd = 27 nM 2399 266487 16302800
LKB1(AAK1 dual inhibitor) Kd = 35 nM 44588117 516312 19035792
Gö7874 IC50 < 40 nM 5327863
Ruboxistaurin IC50 < 40 nM 153999 91829
Staurosporine aglycone IC50 < 40 nM 3035817 281948
TTT-3002 IC50 < 40 nM
Silmitasertib IC50 = 46 nM 24748573 21174434
ALX-270-403-M001 IC50 > 50 nM 22037377
Bisindolylmaleimide I IC50 > 50 nM 2396 7463 22037377
Gö6983 IC50 > 50 nM 3499 261491 22037377
SureCN2212990 IC50 = 57 nM 24811794 493937 19256503
Gö6976 IC50 < 60 nM 3501 302449
AC1NURHU IC50 = 62 nM 5459373 200528
AS601245 IC50 = 80 nM 11422035 191384 17850214
SRT1720 IC50 < 80 nM 24180125 257991
AT9283 IC50 > 100 nM 24905142 19143567
PP242 IC50 = 100 nM 25243800
Princeton's TrkA inhibitor compound 20h IC50 = 100 nM
SureCN3470757 IC50 = 100 nM 11588244 375236
TG003 Kd = 130 nM 1893668 408982 19837585
K-252a; Nocardiopsis sp. IC50 > 150 nM 3813 281948 22037377
PKR Inhibitor IC50 > 150 nM 6490494 235641 22037377
PKR Inhibitor; Negative Control IC50 > 150 nM 16760619 22037377
TBCA IC50 > 150 nM 1095828 22037377
A674563 Kd = 180 nM 11314340 379218 22037378
Enzastaurin Kd = 200 nM 176167 300138 22037378
Lestaurtinib Kd = 200 nM 126565 22037378
BCP9000906 IC50 > 250 nM 5494425 21156 22037377
Gö6976 IC50 > 250 nM 3501 302449 22037377
GSK-3b Inhibitor XI IC50 > 250 nM 10020713 272629 22037377
GSK461364A Kd = 250 nM 15983966 1908394 22037378
JAK3 Inhibitor VI IC50 > 250 nM 16760524 22037377
PI 3-Kg Inhibitor II IC50 > 250 nM 5287855 22037377
Kinome_2917 Ki = 280 nM 11362471 223367 17352464
BX517 IC50 > 300 nM 11161844 228654
GW5074 (Raf1 Kinase Inhibitor I) IC50 < 400 nM 5924208
LY293646 IC50 = 500 nM 9860529 104468 22037377
Alvocidib Kd = 520 nM 9910986 428690 15711537
N-Benzoylstaurosporine Kd = 560 nM 56603681 608533 18183025
Syk Inhibitor IV IC50 < 600 nM 10200390
SureCN4583680 IC50 = 794 nM 44592504 523586 19285393
1;9-Pyrazoloanthrone IC50 < 800 nM 8515 7064
GSK-3 Inhibitor IX IC50 < 800 nM 5287844 409450
GSK269962A IC50 < 800 nM 16095342 220241
KT5720 IC50 < 800 nM 3844 608532
Quercetagetin IC50 < 800 nM 5281680 413552
SB747651A IC50 < 800 nM 11393719 188434
Sodium salicylate (Aspirin) IC50 < 800 nM 16760658 447868
LY294002 IC50 = 820 nM 3973 98350 17850214
GSK690693 Kd = 940 nM 16725726 494089 22037378
ACN-S001855 IC50 > 1 µM 10377751 22037377
Akt Inhibitor X IC50 > 1 µM 16760284 22037377
BCP9000822 IC50 = 1 µM 5278396 222102
BI-D1870 IC50 = 1 µM 25023738 573107
Curcumin IC50 = 1 µM 5281767 116438
GW441756 hydrochloride IC50 = 1 µM 16219400
Icotinib IC50 > 1 µM 22024915 22112293
IDR E804 IC50 > 1 µM 6419764 1802727 22037377
Kenpaullone IC50 = 1 µM 3820 296586
Kinome_714 IC50 > 1 µM 46886323 20346655
LFM-A13 IC50 = 1 µM 54676905 228043
MK5108 IC50 > 1 µM 24748204 20053775
PD158780 IC50 > 1 µM 4707 53753 22037377
PF-3644022 IC50 = 1 µM
Resveratrol IC50 = 1 µM 445154 165
Ro-32-0432 IC50 > 1 µM 127757 26501 22037377
SNS314 IC50 > 1 µM 16047143 514582 18678489
STO609 IC50 > 1 µM 51371511 22037377
SureCN10063060 Ki > 1 µM 52936621 21391610
WZ3146 Kd > 1 µM 44607360 20033049
WZ4002 Kd > 1 µM 44607530 20033049
Zearalenone IC50 = 1 µM 5281576 454173
Kinome_2915 Ki = 1.1 µM 11293798 373598 17352464
Masitinib Kd = 1.3 µM 10074640 22037378
CHEMBL590109 IC50 = 1.4 µM 46224684 590109 19926477
CHEMBL1240703 Kd = 1.8 µM 52945601 1240703 19654408
BMS-777607 IC50 > 2 µM 24794418 19260711
Momelotinib IC50 > 2 µM 25062766 19295546
SB202190 IC50 = 2 µM 5353940 278041
Amgen TBK 1 inhibitor (Compound II) IC50 > 3 µM
Purvalanol B IC50 > 3 µM 448991 23254
SB415286 IC50 < 3 µM 4210951 322970
SureCN4875304 IC50 > 3.5 µM 46871765 20472445
BAY65-1942 IC50 < 4 µM 44572415 516203
BMS-690514 Kd < 4 µM 11349170 21531814
CHEMBL493169 Ki = 4 µM 44219632 493169 19414255
Cot-Tpl2 Inhibitor Compound 38 (Abbott) IC50 < 4 µM
Cot-Tpl2 Inhibitor Compound 41 (Abbott) IC50 < 4 µM
EGCG (Epigallocatechin Gallate) IC50 < 4 µM 65064 297453
FMK IC50 > 4 µM 5737
IKK-2 Inhibitor VIII IC50 < 4 µM 66576999 368427
JNJ-28871063 IC50 > 4 µM 17747413 17975007
PS-1145 IC50 < 4 µM 9949093 79004
SKI II IC50 < 4 µM 753704 1076555
Syk Inhibitor II IC50 < 4 µM 16760670
(5Z)-7-Oxozeaenol IC50 > 4.5 µM 1077979
Doramapimod IC50 > 4.5 µM 156422 103667
Semaxinib IC50 > 4.5 µM 5329098 276711
 

Disease Linkage

General Disease Association:

Cancer
Specific Cancer Types:
Prostate cancer; Marginal zone B-cell lymphomas; Nodal marginal zone B-Cell lymphomas; Lung cancer; Diffuse large B-cell lymphomas (DLBCL)
Comments:
PIM1 is a known oncoprotein (OP). The Pim1 protein is undergoes relatively little mutation in human tumours, about the same as typical proteins. The active form of the protein kinase normally acts to promote tumour cell proliferation. The oncogenic activity of the Pim-1 protein is mediated through the positive regulation of MYC transcription (another oncogene), the regulation of cell cycle progression, and by the inhibition of the pro-apoptotic proteins BAD, MAP3K5, and FOXO3. In addition, Pim-1 has been shown to promote genomic instability. Gain-of-function mutations in the Pim-1 gene resulting in the up-regulation of Pim-1 activity have been observed in several human cancer types, indicating a role in tumorigenesis. For example, significantly elevated Pim-1 expression was observed in several hematopoietic malignancies and in several solid tumours. In animal studies, over-expression of the Pim-1 protein in mice leads to an increased occurence of tumours, while the knockout of Pim-1 expression has no observable phenotypic consequence.
 
Gene Expression in Cancers:

TranscriptoNET (www.transcriptonet.ca) analysis with mRNA expression data retrieved from the National Center for Biotechnology Information's Gene Expression Omnibus (GEO) database, which was normalized against 60 abundantly and commonly found proteins, indicated altered expression for this protein kinase as shown here as the percent change from normal tissue controls (%CFC) as supported with the Student T-test in the following types of human cancers: Barrett's esophagus epithelial metaplasia (%CFC= -61, p<0.008); Cervical epithelial cancer (%CFC= +98, p<0.006); Classical Hodgkin lymphomas (%CFC= +49, p<0.002); Colorectal adenocarcinomas (early onset) (%CFC= +65, p<0.004); Large B-cell lymphomas (%CFC= +101, p<0.007); Oral squamous cell carcinomas (OSCC) (%CFC= -64, p<0.05); Skin fibrosarcomas (%CFC= -61); Skin melanomas - malignant (%CFC= -63, p<0.006); Skin squamous cell carcinomas (%CFC= +168, p<0.093); Vulvar intraepithelial neoplasia (%CFC= +58, p<0.035). The COSMIC website notes an up-regulated expression score for PIM1 in diverse human cancers of 418, which is 0.9-fold of the average score of 462 for the human protein kinases. The down-regulated expression score of 2 for this protein kinase in human cancers was 97% lower than the average score of 60 for the human protein kinases.
Mutagenesis Experiments:

Insertional mutagenesis studies in mice have not yet revealed a role for this protein kinase in mouse cancer oncogenesis.
Mutation Rate in All Cancers:

Percent mutation rates per 100 amino acids length in human cancers: 0.09 % in 26039 diverse cancer specimens. This rate is only 20 % higher than the average rate of 0.075 % calculated for human protein kinases in general.
Mutation Rate in Specific Cancers:

Highest percent mutation rates per 100 amino acids length in human cancers: 0.55 % in 2221 haematopoietic and lymphoid cancers tested.
Frequency of Mutated Sites:

Most frequent mutations with the number of reports indicated in brackets: K24N (6); S97N (6).
Comments:
Only 1 deletion, and no insertions or complex mutations are noted on the COSMIC website.
 
COSMIC Entry:
PIM1
OMIM Entry:
164960
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