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Updated November 2019

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Nomenclature

Short Name:
DAPK1
Full Name:
Death-associated protein kinase 1
Alias:
  • DAP kinase 1
  • DAPK
  • Death associated protein kinase
  • DKFZp781I035
  • EC 2.7.11.1
  • Kinase DAPK1

Classification

Type:
Protein-serine/threonine kinase
Group:
CAMK
Family:
DAPK
SubFamily:
NA
 
 

Specific Links

Entrez-Gene Entry: 1612
Entrez-Protein Entry: NP_004929
GeneCards Entry: DAPK
KinBASE Entry: DAPK1
OMIM Entry: 600831
Pfam Entry: P53355
PhosphoNET Entry: P53355
Phosphosite Plus Entry: 590
Protein Data Bank Entry: 1IG1
ScanSite Entry: P53355
Source Entry: DAPK1
UCSD-Nature Entry: A002502
UniProt Entry: P53355
Kinexus Products: DAPK1
MYL9 (12-23) KinSub - Myosin light chain 9 (A12-S23, human) peptide; PHKG protein kinase substrate peptide - Powder PE-01ADE95

General Links

ClustalW2
GPS-Cuckoo
Human Protein Atlas
Kinase.com
Kinase Research
Kinasource
Kinomer
Netphorest
NetworKIN
Phosida
PhosphoElm
Protein Blast
ScanSite
String

Structure

Mol. Mass (Da):
160073
# Amino Acids:
1430
# mRNA Isoforms:
4
mRNA Isoforms:
161,237 Da (1440 AA; P53355-3); 160,046 Da (1430 AA; P53355); 152,467 Da (1364 AA; P53355-4); 36,765 Da (337 AA; P53355-2)
4D Structure:
Interacts with KLHL20.
1D Structure:
Retrieve Gene Sequence
Retrieve Full Protein Sequence
Retrieve Catalytic Domain Sequence
 
3D Image (rendered using PV Viewer):

PDB ID
4TL0

Subfamily Alignment
subfamily domain
 
Domain Distribution:
Start End Domain
13 275 Pkinase
302 321 CaM_binding
378 407 ANK
411 440 ANK
444 475 ANK
479 508 ANK
512 541 ANK
545 574 ANK
578 607 ANK
611 640 ANK
877 906 ANK
1164 1198 ANK
 

Kinexus Products

Click on entries below for direct links to relevant products from Kinexus for this protein kinase.
hiddentext
○ MYL9 (12-23) KinSub - Myosin light chain 9 (A12-S23, human) peptide; PHKG protein kinase substrate peptide - Powder PE-01ADE95
 

Post-translation Modifications

For detailed information on phosphorylation of this kinase go to PhosphoNET
Acetylated:
K295, K297.
Serine phosphorylated:

S57, S289-, S308-, S319, S326, S333, S606, S724, S725, S728, S734+, S736+, S1117, S1267.
Threonine phosphorylated:

T1266, T1269.
Tyrosine phosphorylated:

Y12, Y13, Y39, Y490, Y491, Y493, Y1060.
 

Distribution

Based on gene microarray analysis from the NCBI
Human Tissue Distribution
% Max Expression:

Mean Expression:

Number of Samples:

Standard Deviation:
% Max Expression:

Mean Expression:

Number of Samples:

Standard Deviation:
  • adipose
    100

    1556

    29

    2470

  • adrenal
    4

    69

    15

    62

  • bladder
    18

    277

    20

    233

  • brain
    25

    383

    109

    480

  • breast
    31

    489

    25

    497

  • cervix
    10

    163

    86

    403

  • colon
    12

    191

    31

    360

  • heart
    72

    1117

    59

    2128

  • intestine
    37

    568

    17

    505

  • kidney
    10

    156

    75

    150

  • liver
    11

    174

    41

    168

  • lung
    64

    993

    183

    1116

  • lymphnode
    12

    194

    42

    182

  • ovary
    14

    217

    12

    167

  • pancreas
    16

    251

    35

    241

  • pituitary
    6

    88

    15

    134

  • prostate
    22

    341

    191

    2960

  • salivarygland
    5

    73

    29

    128

  • skeletalmuscle"
    4

    59

    95

    62

  • skin
    30

    466

    109

    521

  • spinalcord
    16

    245

    33

    213

  • spleen
    12

    193

    37

    161

  • stomach
    15

    228

    30

    208

  • testis
    6

    97

    29

    91

  • thymus
    19

    295

    33

    292

  • thyroid
    30

    464

    73

    581

  • tonsil
    6

    100

    45

    89

  • trachea
    10

    159

    29

    140

  • uterus
    10

    148

    29

    124

  • reticulocytes"
    8

    120

    28

    121

  • t-lymphocytes
    21

    324

    24

    308

  • b-lymphocytes
    65

    1011

    36

    2288

  • neutrophils
    13

    201

    68

    508

  • macrophages
    85

    1325

    57

    933

  • sperm
    13

    196

    35

    135

 

Evolution

Species Conservation
PhosphoNET % Identity:
PhosphoNET % Similarity:
Homologene %
Identity:
PhosphoNET % Identity:
PhosphoNET % Similarity:
Homologene %
Identity:
  • tableheader
    100

    100

    100
  • tableheader
    99.9

    99.9

    100
  • tableheader
    99.4

    99.7

    99
  • tableheader
    -

    -

    96
  • tableheader
    -

    -

    96
  • tableheader
    95.6

    98

    95.5
  • tableheader
    -

    -

    -
  • tableheader
    94.4

    97.6

    95
  • tableheader
    24.2

    28.8

    95
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    60.7

    65.8

    80
  • tableheader
    86.1

    93.8

    87
  • tableheader
    74.8

    87.2

    75
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    34.5

    54.5

    36
  • tableheader
    29.5

    45.9

    -
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
  • tableheader
    -

    -

    -
For a wider analysis go to PhosphoNET Evolution in PhosphoNET
 

Regulation

Activation:
Phosphorylation at Ser-734 increases phosphotransferase activity.
Inhibition:
Phosphorylation at Ser-289 and Ser-308 inhibits phosphotransferase activity and interactions with calmodulin and CHIP.
Synthesis:
Up-regulated following treatment with interferon-gamma
Degradation:
NA
 

Known Upstream Kinases

For further details on these substrates click on the Substrate Short Name or UniProt ID. Phosphosite Location is hyperlinked to PhosphoNET predictions.
Based on in vitro and/or in vivo phosphorylation data

Kinase Short Name UniProt ID (Human) Phosphosite Location Phosphosite Sequence Effect of Phosphorylation
RSK1 Q15418 S289 QALSRKASAVNMEKF -
RSK2 P51812 S289 QALSRKASAVNMEKF -
DAPK1 P53355 S308 ARKKWKQSVRLISLC -
ERK2 P28482 S734 NSSRFPPSPLASKPT +
ERK2 P28482 S736 NSSRFPPSPLASKPT +
 

Known Downstream Substrates

For further details on these substrates click on the Substrate Short Name or UniProt ID. Phosphosite Location is hyperlinked to PhosphoNET predictions.
Based on in vitro and/or in vivo phosphorylation data

Substrate Short Name UniProt ID (Human) Phosphosite Location Phosphosite Sequence Effect of Phosphorylation
BECN1 Q14457 T119 LSRRLKVTGDLFDIM -
CaMKK2 Q96RR4 S511 RREERSLSAPGNLLT
DAPK1 P53355 S308 ARKKWKQSVRLISLC -
GRIN2B (NMDAR2B ) Q13224 S1303 NKLRRQHSYDTFVDL -
MCM3 P25205 S160 KTIERRYSDLTTLVA
MRLC1 (MYL9) P24844 S20 KRPQRATSNVFAMFD
MRLC2 (MYL12B) P19105 S20 KRPQRATSNVFAMFD
MRLC2 (MYL12B) P19105 T19 KKRPQRATSNVFAMF +
p53 P04637 S20 PLSQETFSDLWKLLP +
p53 P04637 T18 EPPLSQETFSDLWKL +
SRF P11831 T159 DNKLRRYTTFSKRKT
STX1A Q16623 S188 IIMDSSISKQALSEI
 

Protein Kinase Specificity

Matrix of observed frequency (%) of amino acids in aligned protein substrate phosphosites

Kinections GIF
Matrix Type:
Experimentally derived from alignment of 12 known protein substrate phosphosites and 10 peptides phosphorylated by recombinant DAPK1 in vitro tested in-house by Kinexus.
Domain #:
1
 

Inhibitors

For further details on these inhibitors click on the Compound Name and enter it into DrugKiNET or click on the ID's
Based on in vitro and/or in vivo phosphorylation data
Compound Name KD, Ki or IC50 (nM) PubChem ID ChEMBL ID PubMed ID
Staurosporine IC50 = 500 pM 5279 19397322
TTT-3002 IC50 = 10 nM
TG101348 Kd = 16 nM 16722836 1287853 22037378
KW2449 Kd = 17 nM 11427553 1908397 22037378
BCP9000906 IC50 < 25 nM 5494425 21156 22037377
PP242 IC50 < 60 nM 25243800
Ruxolitinib Kd = 72 nM 25126798 1789941 22037378
Lestaurtinib Kd = 80 nM 126565 22037378
Amgen TBK 1 inhibitor (Compound II) IC50 = 100 nM
AT9283 IC50 > 100 nM 24905142 19143567
GSK-3 Inhibitor IX IC50 = 100 nM 5287844 409450
K00596a IC50 < 100 nM 9549298 200027
R406 IC50 = 100 nM 11984591
Staurosporine aglycone IC50 < 100 nM 3035817 281948
Sunitinib Kd = 120 nM 5329102 535 18183025
AG-E-60384 IC50 > 150 nM 6419741 413188 22037377
K-252a; Nocardiopsis sp. IC50 > 150 nM 3813 281948 22037377
GSK-3 Inhibitor XIII IC50 > 250 nM 6419766 359482 22037377
SB218078 IC50 > 250 nM 447446 289422 22037377
STO609 IC50 > 250 nM 51371511 22037377
SU14813 Kd = 270 nM 10138259 1721885 18183025
SU11652 IC50 = 500 nM 24906267 13485 22037377
BI2536 Kd = 540 nM 11364421 513909 22037378
Syk Inhibitor IV IC50 < 600 nM 10200390
GSK1838705A Kd = 620 nM 25182616 464552 22037378
BX795 IC50 < 800 nM 10077147 577784
GSK2334470 IC50 < 800 nM 46215815 1765740
GSK650394A IC50 > 900 nM 25022668 558642
Ruboxistaurin Kd = 970 nM 153999 91829 18183025
Cot-Tpl2 Inhibitor Compound 38 (Abbott) IC50 = 1 µM
CZC-25146 IC50 = 1 µM
IKK-3 inhibitor IX IC50 = 1 µM 11626927 373751
MK5108 IC50 > 1 µM 24748204 20053775
Ro-31-8220 IC50 = 1 µM 5083 6291
Silmitasertib IC50 > 1 µM 24748573 21174434
SNS314 IC50 > 1 µM 16047143 514582 18678489
Sodium salicylate (Aspirin) IC50 = 1 µM 16760658 447868
Wyeth PDK1 Inhibitor Compound 1 IC50 = 1 µM
WZ3146 Kd > 1 µM 44607360 20033049
WZ4002 Kd > 1 µM 44607530 20033049
A674563 Kd = 1.6 µM 11314340 379218 22037378
NVP-TAE684 Kd = 1.8 µM 16038120 509032 22037378
CHEMBL573339 Kd = 2.4 µM 9884685 573339 18183025
PI-103 Kd = 2.4 µM 16739368 538346 18183025
GSK690693 Kd = 3 µM 16725726 494089 22037378
Syk Inhibitor II IC50 > 3 µM 16760670
SureCN4875304 IC50 > 3.5 µM 46871765 20472445
BMS-690514 Kd = 4 µM 11349170 21531814
Cot-Tpl2 Inhibitor Compound 41 (Abbott) IC50 < 4 µM
JNJ-28871063 IC50 > 4 µM 17747413 17975007
PF-3644022 IC50 < 4 µM
BI-78D3 IC50 > 4.5 µM 2747117 508280
GDC-0941 IC50 > 4.5 µM 17755052 521851
GSK461364A IC50 > 4.5 µM 15983966 1908394
MRT67307 IC50 > 4.5 µM 44464263
Semaxinib IC50 > 4.5 µM 5329098 276711
N-Benzoylstaurosporine Kd = 4.7 µM 56603681 608533 18183025
 

Disease Linkage

General Disease Association:

Cancer
Specific Cancer Types:
Central nervous system lymphomas (CNSL); Cervical squamous cell carcinomas; Choroid plexus papillomas (CPP); Pediatric lymphomas
Comments:
DAPK1 appears to be a tumour suppressor protein (TSP). Cancer-related mutations in human tumours point to a loss of function of the protein kinase. Loss of expression of DAPK1 has been observed in many types of cancer. In mouse lung carcinoma studies, it has been shown that clones with highly aggressive metastatic behavior did not express DAPK, and restoration of DAPK suppressed lung cancer metastasis. Another study showed that epigenetic silencing of DAPK1 by promoter methylation is found in almost all cases of sporadic chronic lymphocytic leukemia.
 
Gene Expression in Cancers:

TranscriptoNET (www.transcriptonet.ca) analysis with mRNA expression data retrieved from the National Center for Biotechnology Information's Gene Expression Omnibus (GEO) database, which was normalized against 60 abundantly and commonly found proteins, indicated altered expression for this protein kinase as shown here as the percent change from normal tissue controls (%CFC) as supported with the Student T-test in the following types of human cancers: Bladder carcinomas (%CFC= +111, p<0.033); Brain glioblastomas (%CFC= +314, p<0.037); Classical Hodgkin lymphomas (%CFC= +226, p<0.023); Oral squamous cell carcinomas (OSCC) (%CFC= +93, p<0.007); Ovary adenocarcinomas (%CFC= -75, p<0.005); Prostate cancer - primary (%CFC= +53, p<0.0009); and Uterine fibroids (%CFC= -57, p<0.019). The COSMIC website notes an up-regulated expression score for DAPK1 in diverse human cancers of 347, which is 0.8-fold of the average score of 462 for the human protein kinases. The down-regulated expression score of 8 for this protein kinase in human cancers was 0.1-fold of the average score of 60 for the human protein kinases.
Mutagenesis Experiments:

Insertional mutagenesis studies in mice support a role for this protein kinase in mouse cancer oncogenesis.
Mutation Rate in All Cancers:

Percent mutation rates per 100 amino acids length in human cancers: 0.08 % in 24751 diverse cancer specimens. This rate is very similar (+ 6% higher) to the average rate of 0.075 % calculated for human protein kinases in general.
Mutation Rate in Specific Cancers:

Highest percent mutation rates per 100 amino acids length in human cancers: 0.53 % in 1093 large intestine cancers tested; 0.29 % in 602 endometrium cancers tested; 0.23 % in 589 stomach cancers tested; 0.21 % in 805 skin cancers tested; 0.15 % in 500 urinary tract cancers tested; 0.12 % in 1226 kidney cancers tested; 0.09 % in 1619 lung cancers tested; 0.08 % in 1292 breast cancers tested.
Frequency of Mutated Sites:

Most frequent mutations with the number of reports indicated in brackets: F119C (9). These mutations are located in the kinase catalytic domain.
Comments:
Only 1 deletion and 1 insertion and no complex mutations are noted on the COSMIC website.
 
COSMIC Entry:
DAPK1
OMIM Entry:
600831
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